Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
821
histone modifications
762
candidate regulatory elements
695
binding sites
173
gene expression
10
accessible chromatin
8
chromatin state
3
eQTL
2
target gene predictions
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2468
February, 2021
2304
September, 2022
379
May, 2021
359
February, 2024
307
November, 2021
275
June, 2020
251
September, 2023
140
May, 2020
127
August, 2021
115
March, 2020
99
January, 2022
93
October, 2022
73
January, 2020
66
March, 2023
59
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
33
August, 2017
28
February, 2023
26
March, 2024
16
April, 2020
12
October, 2019
11
November, 2019
9
August, 2018
8
April, 2019
8
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2292
bed bed3+
174
tsv
81
txt
13
bigWig
7
bed bed9
7
bigBed bed9
3
bigBed narrowPeak
Organism
2476
Homo sapiens
Biosample type
1272
cell line
614
tissue
406
primary cell
184
in vitro differentiated cells
Organ
196
epithelium
189
kidney
110
brain
109
connective tissue
92
musculature of body
74
bodily fluid
71
intestine
70
blood
70
lung
skin of body
58
limb
54
heart
53
embryo
vasculature
46
large intestine
36
blood vessel
36
bone element
33
extraembryonic component
32
pancreas
29
prostate gland
29
stomach
28
mammary gland
28
penis
27
lymph node
26
liver
23
adipose tissue
18
placenta
18
small intestine
18
ureter
17
eye
15
artery
adrenal gland
12
gonad
11
thymus
10
esophagus
10
spleen
10
uterus
9
skeleton
9
spinal cord
8
testis
7
vein
5
bone marrow
5
bronchus
5
lymphatic vessel
5
lymphoid tissue
4
mouth
4
ovary
4
thyroid gland
4
trachea
3
breast
3
nerve
2
tongue
2
vagina
1
pituitary gland
1
urinary bladder
Project
2476
AMP
Genome assembly (visualization)
2302
hg19
17
GRCh38
organ_slims!
adrenal gland
skin of body
vasculature
BIOSAMPLE
TYPE
2476 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
chromatin state
eQTL
target gene predictions
representative DNase hypersensitivity sites
variant allelic effects
cell line
breast cancer cell
11
9
neuroblastoma cell
8
4
gastric cancer cell
9
2
Rhabdomyosarcoma
8
1
liposarcoma
6
3
+ See 687 more…
tissue
kidney
2
15
1
7
1
heart
1
18
1
1
1
stomach
1
21
brain
3
13
1
lung
17
+ See 166 more…
primary cell
epithelial cell of proximal tubule
1
14
common myeloid progenitor, CD34-positive
14
glomerular endothelial cell
1
12
mammary epithelial cell
3
3
3
CD4-positive, alpha-beta T cell
8
+ See 157 more…
in vitro differentiated cells
cardiomyocytes
11
hematopoietic multipotent progenitor cell
1
9
1
induced pluripotent stem cell
9
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 76 more…
See all biosamples
Download