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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
35
ATAC-seq
5
total RNA-seq
1
Hi-C
1
single cell RNA-seq
Assay category
62
DNA binding
35
DNA accessibility
6
Transcription
1
3D chromatin structure
Target of assay
47
histone
47
histone modification
30
broad histone mark
17
narrow histone mark
10
control
5
transcription factor
3
RNA binding protein
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
87
bed narrowPeak
66
bam
57
bigWig
46
bigBed narrowPeak
5
tsv
1
bedpe bed3+
1
hic
Organism
104
Homo sapiens
Biosample type
103
tissue
1
in vitro differentiated cells
Organ
135
pancreas
113
epithelium
104
heart
87
brain
82
blood vessel
82
vasculature
69
limb
61
artery
53
kidney
52
eye
42
nerve
21
vein
20
connective tissue
9
bone element
8
skeleton
7
liver
4
gonad
4
ovary
2
adipose tissue
2
embryo
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
104
AMP
Genome assembly (visualization)
91
GRCh38
58
hg19
Lab
104
AMP-T2D consortium
BIOSAMPLE
ASSAY
104 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
single cell RNA-seq
tissue
coronary artery
35
heart left ventricle
35
heart
14
2
1
1
heart right ventricle
13
cardiac atrium
1
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in vitro differentiated cells
cardiac fibroblast
1
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