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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
ChIP-seq
8
ATAC-seq
Assay category
206
DNA binding
8
DNA accessibility
Target of assay
164
histone
164
histone modification
105
broad histone mark
59
narrow histone mark
40
control
11
transcription factor
RNA binding protein
Date released
715
February, 2021
401
August, 2017
394
May, 2021
360
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
88
December, 2017
76
April, 2019
73
September, 2018
65
October, 2018
64
March, 2020
62
November, 2018
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
31
December, 2018
25
February, 2020
23
October, 2017
22
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
205
bam
168
bigWig
166
bed narrowPeak
159
bigBed narrowPeak
17
fastq
14
tagAlign
4
bed broadPeak
Organism
214
Homo sapiens
Biosample type
210
tissue
4
primary cell
Organ
73
heart
47
blood vessel
47
vasculature
44
brain
26
kidney
7
limb
7
musculature of body
7
pancreas
4
artery
4
epithelium
1
adipose tissue
1
connective tissue
1
spleen
Project
214
AMP
Genome assembly (visualization)
167
hg19
166
GRCh38
Lab
213
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
target.investigated_as!
RNA binding protein
chromatin remodeller
BIOSAMPLE
ASSAY
214 results
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ChIP-seq
ATAC-seq
tissue
heart left ventricle
32
kidney
22
ascending aorta
15
brain
15
temporal lobe
15
+ See 15 more…
primary cell
kidney epithelial cell
4
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