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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
338
ChIP-seq
Assay category
338
DNA binding
Target of assay
250
transcription factor
histone
148
histone modification
87
broad histone mark
85
control
66
recombinant protein
61
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
213
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
337
bam
306
fastq
264
bigWig
244
bed narrowPeak
244
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
338
Homo sapiens
Biosample type
300
cell line
32
tissue
6
primary cell
Organ
300
liver
18
brain
15
heart
5
kidney
4
epithelium
4
vasculature
2
blood vessel
Project
338
AMP
Genome assembly (visualization)
262
hg19
212
GRCh38
Lab
338
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
month_released!
January, 2019
target.investigated_as!
histone
BIOSAMPLE
ASSAY
338 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
heart left ventricle
11
kidney
5
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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