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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
401
ChIP-seq
Assay category
401
DNA binding
Target of assay
250
transcription factor
148
histone
148
histone modification
87
broad histone mark
control
66
recombinant protein
61
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
254
October, 2019
204
June, 2019
200
May, 2022
174
February, 2023
168
July, 2018
104
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
386
bam
383
bigWig
378
bed narrowPeak
376
bigBed narrowPeak
265
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
Organism
401
Homo sapiens
Biosample type
259
cell line
136
tissue
6
primary cell
Organ
259
liver
76
brain
47
heart
19
kidney
4
epithelium
4
vasculature
2
blood vessel
Project
401
AMP
Genome assembly (visualization)
344
GRCh38
330
hg19
Lab
401
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
eye
target.investigated_as!
control
BIOSAMPLE
ASSAY
401 results
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Clear Filters
ChIP-seq
cell line
HepG2
259
tissue
heart left ventricle
29
kidney
19
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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