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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
6
total RNA-seq
3
DNase-seq
Assay category
18
DNA binding
6
Transcription
3
DNA accessibility
Target of assay
26
histone
histone modification
13
broad histone mark
13
narrow histone mark
10
control
8
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
130
August, 2021
80
June, 2019
47
September, 2023
22
October, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
April, 2019
3
December, 2019
2
March, 2020
2
May, 2019
Available data
25
bam
14
bigWig
8
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
27
Homo sapiens
Biosample type
15
cell line
7
tissue
5
primary cell
Organ
27
kidney
26
limb
19
eye
18
heart
18
nerve
14
blood vessel
14
epithelium
14
vasculature
11
pancreas
9
brain
8
artery
6
vein
3
connective tissue
2
liver
1
adipose tissue
1
pituitary gland
1
skin of body
Project
27
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
27
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
target.investigated_as!
chromatin remodeller
histone modification
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
tissue
kidney
7
primary cell
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
epithelial cell of proximal tubule
1
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