Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
31
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
1
pCHi-C
Assay category
193
DNA accessibility
31
DNA binding
9
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
214
bam
206
bed narrowPeak
206
bigBed narrowPeak
206
bigWig
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
1
bedpe bed3+
1
fastq
Organism
233
Homo sapiens
Biosample type
178
tissue
55
primary cell
1
in vitro differentiated cells
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
23
epithelium
19
connective tissue
19
lung
18
ureter
7
eye
pancreas
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
Project
215
AMP
19
LungMap
Genome assembly (visualization)
206
GRCh38
185
hg19
Lab
215
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
26
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
234 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
single cell RNA-seq
pCHi-C
tissue
lung
10
9
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 33 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
in vitro differentiated cells
white fat cell
1
See all biosamples
Download