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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
25
ChIP-seq
14
ATAC-seq
2
Capture-C
Assay category
26
Transcription
25
DNA binding
14
DNA accessibility
Target of assay
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
1
control
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
0
April, 2020
Available data
65
bam
64
bigWig
61
fastq
38
bed narrowPeak
26
tsv
14
bigBed narrowPeak
4
tagAlign
3
bed bed3+
Organism
67
Homo sapiens
Biosample type
65
primary cell
2
cell line
Organ
130
kidney
92
heart
76
pancreas
67
epithelium
35
liver
19
lung
8
embryo
6
blood vessel
6
vasculature
5
connective tissue
2
artery
1
adipose tissue
Project
67
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
67
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
21
missing controlled_by
BIOSAMPLE
ASSAY
67 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
Capture-C
primary cell
pancreatic ductal cell
4
13
4
pancreatic beta cell
10
4
pancreatic acinar cell
2
8
3
pancreatic alpha cell
10
3
hepatocyte
4
cell line
EndoC_BH1
2
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