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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
6
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
89
DNA binding
6
DNA methylation
2
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
34
transcription factor
narrow histone mark
14
control
4
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
97
August, 2017
23
October, 2018
18
July, 2019
14
February, 2023
14
June, 2019
6
November, 2020
5
August, 2021
3
October, 2019
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
59
fastq
58
bam
51
bigWig
32
bed narrowPeak
15
tagAlign
11
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
97
Homo sapiens
Biosample type
52
in vitro differentiated cells
45
tissue
Organ
154
pancreas
97
connective tissue
45
adipose tissue
41
liver
21
epithelium
19
musculature of body
Project
97
AMP
Genome assembly (visualization)
52
GRCh38
50
hg19
Lab
97
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
April, 2018
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
51
1
tissue
subcutaneous abdominal adipose tissue
25
3
white adipose tissue
12
adipose tissue
1
3
subcutaneous adipose tissue
1
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