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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
201
ChIP-seq
Assay category
201
DNA binding
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
201
August, 2017
196
October, 2019
140
May, 2021
103
November, 2017
92
May, 2019
60
April, 2019
35
May, 2024
34
December, 2017
32
September, 2018
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
13
January, 2019
12
October, 2017
10
November, 2019
7
November, 2018
3
March, 2020
2
December, 2018
Available data
125
bigWig
110
bed narrowPeak
105
bam
105
fastq
74
tagAlign
38
bed broadPeak
31
bigBed narrowPeak
12
bed bed3+
12
bigBed broadPeak
Organism
195
Homo sapiens
Biosample type
123
tissue
39
in vitro differentiated cells
39
primary cell
Organ
71
connective tissue
66
pancreas
32
adipose tissue
32
liver
19
musculature of body
14
epithelium
Project
201
AMP
Genome assembly (visualization)
125
hg19
105
GRCh38
Lab
201
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
12
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
month_released!
March, 2023
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ChIP-seq
tissue
liver
32
subcutaneous abdominal adipose tissue
31
islet of Langerhans
28
skeletal muscle tissue
19
pancreas
12
+ See 1 more…
in vitro differentiated cells
adipocyte
39
primary cell
skeletal muscle myoblast
13
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
See all biosamples
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