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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
6
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
38
DNA binding
6
DNA methylation
1
DNA accessibility
Target of assay
32
histone
32
histone modification
20
broad histone mark
narrow histone mark
12
transcription factor
6
control
Date released
386
February, 2021
45
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
18
fastq
16
bam
15
bigWig
5
tagAlign
4
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
Organism
46
Homo sapiens
Biosample type
45
tissue
1
in vitro differentiated cells
Organ
157
pancreas
98
connective tissue
46
adipose tissue
41
liver
24
epithelium
19
musculature of body
Project
46
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
46
AMP-T2D consortium
Audit category:
12
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
subcutaneous abdominal adipose tissue
25
3
white adipose tissue
12
adipose tissue
1
3
subcutaneous adipose tissue
1
in vitro differentiated cells
white fat cell
1
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