Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
954
histone modifications
835
candidate regulatory elements
719
binding sites
278
gene expression
185
target gene predictions
72
Fine-mapped variants
40
chromatin state
37
accessible chromatin
6
eQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2588
February, 2021
2505
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
105
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
41
May, 2024
35
August, 2017
32
February, 2023
29
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2771
bed bed3+
345
tsv
83
txt
27
bigWig
9
bigBed bed9
5
bed bed9
3
bigBed narrowPeak
1
bam
Organism
3140
Homo sapiens
Biosample type
1379
cell line
793
tissue
723
primary cell
242
in vitro differentiated cells
3
stem cell
Organ
239
epithelium
191
kidney
165
brain
141
connective tissue
110
musculature of body
83
intestine
80
bodily fluid
76
blood
76
lung
76
pancreas
74
skin of body
70
limb
67
heart
65
vasculature
62
embryo
55
large intestine
52
blood vessel
42
liver
36
adipose tissue
36
bone element
36
extraembryonic component
33
stomach
31
mammary gland
31
prostate gland
29
penis
28
lymph node
23
artery
21
small intestine
19
placenta
18
ureter
17
adrenal gland
17
eye
14
gonad
13
spinal cord
13
thymus
12
spleen
12
uterus
11
esophagus
11
pituitary gland
10
vein
9
skeleton
8
testis
6
nerve
6
ovary
5
bone marrow
5
bronchus
5
lymphatic vessel
5
lymphoid tissue
5
thyroid gland
4
breast
4
mouth
4
trachea
2
tongue
2
urinary bladder
vagina
Project
3140
AMP
Genome assembly (visualization)
2860
hg19
180
GRCh38
organ_slims!
vagina
BIOSAMPLE
TYPE
3140 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
Fine-mapped variants
chromatin state
accessible chromatin
eQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
variant allelic effects
cell line
breast cancer cell
11
9
EndoC_BH1
1
1
8
1
7
neuroblastoma cell
8
4
gastric cancer cell
9
2
pituitary stalk
10
+ See 713 more…
tissue
kidney
2
15
1
7
stomach
1
21
2
heart
1
18
1
1
1
lung
17
1
adrenal gland
14
3
+ See 191 more…
primary cell
monocyte
86
1
15
13
1
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
2
CD14-positive monocyte
4
15
common myeloid progenitor, CD34-positive
14
1
epithelial cell of proximal tubule
1
14
+ See 209 more…
in vitro differentiated cells
adipocyte
1
2
1
1
4
4
embryonic stem cell
1
1
1
5
5
hematopoietic multipotent progenitor cell
1
9
1
1
cardiomyocytes
11
induced pluripotent stem cell
9
+ See 92 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
Download