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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
14
DNase-seq
3
ATAC-seq
Assay category
32
DNA binding
17
DNA accessibility
Target of assay
16
histone
16
histone modification
14
control
10
narrow histone mark
6
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
49
bam
35
bed narrowPeak
35
bigWig
29
fastq
21
bigBed narrowPeak
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
Organism
49
Homo sapiens
Biosample type
49
primary cell
Organ
192
pancreas
143
connective tissue
81
kidney
69
musculature of body
58
adipose tissue
56
liver
49
epithelium
35
heart
32
limb
30
brain
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
Project
49
AMP
Genome assembly (visualization)
35
GRCh38
29
hg19
Lab
49
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
4
inconsistent control read length
month_released!
February, 2020
May, 2020
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
epithelial cell of proximal tubule
3
1
retinal pigment epithelial cell
3
1
glomerular visceral epithelial cell
2
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