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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
19
ATAC-seq
6
total RNA-seq
Assay category
30
DNA binding
19
DNA accessibility
6
Transcription
Target of assay
16
histone
16
histone modification
13
control
10
narrow histone mark
6
broad histone mark
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
39
bam
29
fastq
26
bigWig
20
bed narrowPeak
6
tsv
3
bigBed narrowPeak
3
tagAlign
Organism
55
Homo sapiens
Biosample type
29
primary cell
21
cell line
5
in vitro differentiated cells
Organ
249
pancreas
127
connective tissue
57
adipose tissue
55
epithelium
54
liver
26
musculature of body
3
heart
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
54
AMP
1
T1D
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
55
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
4
inconsistent control read length
month_released!
April, 2019
February, 2021
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic acinar cell
1
cell line
EndoC_BH1
1
16
4
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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