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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
89
total RNA-seq
4
WGBS
3
ATAC-seq
3
DNase-seq
2
FAIRE-seq
Assay category
94
DNA binding
89
Transcription
8
DNA accessibility
4
DNA methylation
Target of assay
66
histone
66
histone modification
34
narrow histone mark
32
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
175
bam
175
fastq
166
bigWig
89
tsv
52
bed narrowPeak
21
bed bed3+
20
bigBed narrowPeak
16
tagAlign
14
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
2
bigBed broadPeak
Organism
188
Homo sapiens
Biosample type
154
tissue
41
primary cell
Organ
195
pancreas
126
connective tissue
91
liver
58
adipose tissue
29
epithelium
26
musculature of body
15
blood
15
bodily fluid
9
spleen
2
brain
Project
195
AMP
Genome assembly (visualization)
162
hg19
158
GRCh38
Lab
195
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
pancreas
14
2
1
body of pancreas
2
2
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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