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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
3
WGBS
2
ATAC-seq
1
DNase-seq
1
RRBS
1
total RNA-seq
Assay category
16
DNA binding
4
DNA methylation
3
DNA accessibility
1
Transcription
Target of assay
38
histone modification
histone
22
broad histone mark
15
narrow histone mark
11
control
4
transcription factor
Date released
300
November, 2017
167
May, 2020
53
November, 2018
46
December, 2017
40
May, 2022
29
August, 2021
22
August, 2017
10
July, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
2
October, 2019
1
December, 2018
1
February, 2020
Available data
16
bam
16
fastq
7
bed narrowPeak
7
bigWig
3
bed bed3+
3
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigBed narrowPeak
1
tsv
Organism
24
Homo sapiens
Biosample type
23
tissue
1
primary cell
Organ
133
pancreas
59
connective tissue
29
epithelium
26
adipose tissue
26
limb
24
liver
22
kidney
19
eye
18
nerve
14
blood vessel
14
vasculature
9
brain
8
artery
7
musculature of body
6
vein
3
heart
1
pituitary gland
skin of body
Project
24
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
skin of body
target.investigated_as!
histone
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
total RNA-seq
tissue
liver
16
3
1
1
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
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