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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 179ChIP-seq
  • 89total RNA-seq
  • 6RRBS
  • 4ATAC-seq
  • 4DNase-seq
  • 3WGBS
  • 1FAIRE-seq
Assay category
  • 179DNA binding
  • 89Transcription
  • 9DNA accessibility
  • 9DNA methylation
Target of assay
  • 130histone modification
  • 129histone
  • 69broad histone mark
  • 60narrow histone mark
  • 36control
  • 13transcription factor
  • 4RNA binding protein
  • 1chromatin remodeller
Date released
  • 406November, 2017
  • 397May, 2021
  • 341May, 2020
  • 314August, 2021
  • 310October, 2019
  • 286August, 2017
  • 260February, 2021
  • 200June, 2019
  • 200May, 2022
  • 191February, 2023
  • 166July, 2018
  • 120May, 2019
  • 94December, 2017
  • 90July, 2019
  • 87November, 2018
  • 80April, 2019
  • 73September, 2018
  • 62March, 2020
  • 60November, 2019
  • 59September, 2020
  • 53October, 2018
  • 47April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 23February, 2020
  • 22October, 2017
  • 19April, 2020
  • 16January, 2021
  • 14May, 2023
  • 11September, 2017
  • 10December, 2019
  • 10November, 2020
  • 7August, 2020
  • 7January, 2018
  • 5March, 2019
  • 5March, 2023
  • 4October, 2022
  • 3August, 2018
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 215fastq
  • 211bam
  • 207bigWig
  • 96bed narrowPeak
  • 89tsv
  • 63tagAlign
  • 39bed broadPeak
  • 39bigBed narrowPeak
  • 22bed bed3+
  • 14bigBed broadPeak
  • 4bed bedMethyl
  • 4bigBed bedMethyl
Organism
  • 279Homo sapiens
Biosample type
  • 227tissue
  • 59primary cell
Organ
  • 188pancreas
  • connective tissue
  • 57adipose tissue
  • 54liver
  • 29epithelium
  • 26musculature of body
Project
  • 286AMP
Genome assembly (visualization)
  • 212hg19
  • 184GRCh38
Lab
  • 286AMP-T2D consortium
Audit category:
  • 22missing controlled_by
Audit category:
  • 10inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
organ_slims!
  • connective tissue
BIOSAMPLE
ASSAY

286 results

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Clear Filters
ChIP-seq
total RNA-seq
RRBS
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
tissue
islet of Langerhans428911
liver4813
skeletal muscle tissue224
pancreas14
right lobe of liver11
primary cell
skeletal muscle myoblast1512
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
pancreatic acinar cell1
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