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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 270ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5DNase-seq
  • 2ATAC-seq
  • 1FAIRE-seq
Assay category
  • 270DNA binding
  • 89Transcription
  • 15DNA methylation
  • 8DNA accessibility
Target of assay
  • 185histone modification
  • 184histone
  • 103broad histone mark
  • 80narrow histone mark
  • 47transcription factor
  • 38control
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 683February, 2021
  • 400November, 2017
  • 382August, 2017
  • 373May, 2021
  • 341May, 2020
  • 313August, 2021
  • 279October, 2019
  • 198June, 2019
  • 153February, 2023
  • 135July, 2018
  • 120May, 2022
  • 115May, 2019
  • 95July, 2019
  • 88November, 2018
  • 80April, 2019
  • 75December, 2017
  • 74October, 2018
  • 58March, 2020
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16April, 2018
  • 16January, 2021
  • 15May, 2023
  • 12September, 2018
  • 10November, 2020
  • 8January, 2018
  • 6September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 258fastq
  • 255bigWig
  • 253bam
  • 125bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 41bed broadPeak
  • 39bigBed narrowPeak
  • 33bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 375Homo sapiens
Biosample type
  • 284tissue
  • 68in vitro differentiated cells
  • 30primary cell
Organ
  • 188pancreas
  • 125connective tissue
  • 57adipose tissue
  • 54liver
  • epithelium
  • 26musculature of body
Project
  • 382AMP
Genome assembly (visualization)
  • 259hg19
  • 232GRCh38
Lab
  • 382AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 12inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

382 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans428911
liver4831
subcutaneous abdominal adipose tissue363
skeletal muscle tissue224
pancreas14
in vitro differentiated cells
adipocyte671
primary cell
skeletal muscle myoblast1512
pancreatic endocrine cell12
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