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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 248ChIP-seq
  • 89total RNA-seq
  • 6WGBS
  • 5RRBS
  • 4ATAC-seq
  • 4DNase-seq
  • 1FAIRE-seq
Assay category
  • 248DNA binding
  • 89Transcription
  • 11DNA methylation
  • 9DNA accessibility
Target of assay
  • 166histone
  • 166histone modification
  • 90broad histone mark
  • 75narrow histone mark
  • 43transcription factor
  • 39control
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 712February, 2021
  • 399May, 2021
  • 357August, 2017
  • 307October, 2019
  • 284August, 2021
  • 216June, 2019
  • 205February, 2023
  • 168July, 2018
  • 160May, 2022
  • 147May, 2020
  • 120May, 2019
  • 98July, 2019
  • 91November, 2017
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 61March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35November, 2018
  • 34December, 2018
  • 31December, 2017
  • 25January, 2019
  • 24February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 5December, 2019
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 259fastq
  • 256bam
  • 254bigWig
  • 124bed narrowPeak
  • 89tsv
  • 65tagAlign
  • 41bed broadPeak
  • 36bigBed narrowPeak
  • 30bed bed3+
  • 15bigBed broadPeak
  • 5bed bedMethyl
  • 5bigBed bedMethyl
Organism
  • 350Homo sapiens
Biosample type
  • 230tissue
  • 68in vitro differentiated cells
  • 59primary cell
Organ
  • 188pancreas
  • 125connective tissue
  • 57adipose tissue
  • liver
  • 29epithelium
  • 26musculature of body
Project
  • 357AMP
Genome assembly (visualization)
  • 256hg19
  • 230GRCh38
Lab
  • 357AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 15inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
organ_slims!
  • liver
BIOSAMPLE
ASSAY

357 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans428911
subcutaneous abdominal adipose tissue363
skeletal muscle tissue224
pancreas14
white adipose tissue12
in vitro differentiated cells
adipocyte671
primary cell
skeletal muscle myoblast1512
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
pancreatic acinar cell1
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