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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
62
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
62
DNA binding
5
DNA accessibility
Target of assay
66
histone
66
histone modification
34
narrow histone mark
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
157
July, 2018
156
August, 2017
104
May, 2022
61
May, 2021
56
February, 2023
55
September, 2018
49
November, 2019
39
April, 2018
34
October, 2018
32
February, 2021
27
December, 2018
22
November, 2018
19
September, 2020
18
January, 2019
16
January, 2021
14
March, 2020
14
October, 2019
11
September, 2017
10
November, 2020
7
August, 2020
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
January, 2018
1
June, 2018
Available data
144
bam
144
fastq
131
bigWig
89
tsv
26
bed narrowPeak
13
bed bed3+
9
bigBed narrowPeak
8
tagAlign
4
bed broadPeak
Organism
153
Homo sapiens
Biosample type
125
tissue
31
primary cell
Organ
156
pancreas
85
connective tissue
37
adipose tissue
35
liver
23
epithelium
14
musculature of body
0
blood
Project
156
AMP
Genome assembly (visualization)
131
hg19
128
GRCh38
Lab
156
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
5
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
156 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
28
1
1
pancreas
6
primary cell
pancreatic alpha cell
10
1
pancreatic beta cell
10
1
pancreatic endocrine cell
8
pancreatic acinar cell
1
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