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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 280ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 5ATAC-seq
  • 2DNase-seq
  • 2RRBS
  • 1FAIRE-seq
Assay category
  • 280DNA binding
  • 89Transcription
  • 11DNA methylation
  • 8DNA accessibility
Target of assay
  • 187histone modification
  • 186histone
  • 103broad histone mark
  • 82narrow histone mark
  • 48control
  • 45transcription factor
  • 6RNA binding protein
  • 2chromatin remodeller
Date released
  • 683February, 2021
  • 388August, 2017
  • 385May, 2021
  • 301August, 2021
  • 285May, 2020
  • 240October, 2019
  • 200May, 2022
  • 199February, 2023
  • 186June, 2019
  • 167July, 2018
  • 111November, 2017
  • 106May, 2019
  • 84July, 2019
  • 79April, 2019
  • 73September, 2018
  • 69October, 2018
  • 59September, 2020
  • 49April, 2018
  • 48March, 2020
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 38November, 2019
  • 35December, 2017
  • 26November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 15May, 2023
  • 13January, 2021
  • 11September, 2017
  • 10November, 2020
  • 9January, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3December, 2019
  • 3June, 2018
  • 1August, 2022
Available data
  • 265fastq
  • 263bam
  • 254bigWig
  • 125bed narrowPeak
  • 89tsv
  • 73tagAlign
  • 33bed bed3+
  • 26bed broadPeak
  • 25bigBed narrowPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
Organism
  • 381Homo sapiens
Biosample type
  • 281tissue
  • 67in vitro differentiated cells
  • 40primary cell
Organ
  • 187pancreas
  • 124connective tissue
  • 57adipose tissue
  • 53liver
  • 28epithelium
  • 24musculature of body
Project
  • 388AMP
Genome assembly (visualization)
  • 254hg19
  • 235GRCh38
Lab
  • 388AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 15inconsistent control read length
  • 1inconsistent assembly
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

388 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
DNase-seq
RRBS
FAIRE-seq
tissue
islet of Langerhans428911
liver483
subcutaneous abdominal adipose tissue363
skeletal muscle tissue222
pancreas14
in vitro differentiated cells
adipocyte67
primary cell
pancreatic alpha cell131
pancreatic beta cell121
pancreatic endocrine cell12
pancreatic acinar cell1
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