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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
280
ChIP-seq
89
total RNA-seq
9
WGBS
5
ATAC-seq
2
DNase-seq
2
RRBS
1
FAIRE-seq
Assay category
280
DNA binding
89
Transcription
11
DNA methylation
8
DNA accessibility
Target of assay
187
histone modification
186
histone
103
broad histone mark
82
narrow histone mark
48
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
683
February, 2021
388
August, 2017
385
May, 2021
301
August, 2021
285
May, 2020
240
October, 2019
200
May, 2022
199
February, 2023
186
June, 2019
167
July, 2018
111
November, 2017
106
May, 2019
84
July, 2019
79
April, 2019
73
September, 2018
69
October, 2018
59
September, 2020
49
April, 2018
48
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
38
November, 2019
35
December, 2017
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
13
January, 2021
11
September, 2017
10
November, 2020
9
January, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
December, 2019
3
June, 2018
1
August, 2022
Available data
265
fastq
263
bam
254
bigWig
125
bed narrowPeak
89
tsv
73
tagAlign
33
bed bed3+
26
bed broadPeak
25
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
381
Homo sapiens
Biosample type
281
tissue
67
in vitro differentiated cells
40
primary cell
Organ
187
pancreas
124
connective tissue
57
adipose tissue
53
liver
28
epithelium
24
musculature of body
Project
388
AMP
Genome assembly (visualization)
254
hg19
235
GRCh38
Lab
388
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
15
inconsistent control read length
1
inconsistent assembly
replication_type!
isogenic
BIOSAMPLE
ASSAY
388 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
DNase-seq
RRBS
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
liver
48
3
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
2
pancreas
14
+ See 4 more…
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
12
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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