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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
4
DNase-seq
4
RRBS
Assay category
48
DNA binding
4
DNA accessibility
4
DNA methylation
Target of assay
24
histone
24
histone modification
20
transcription factor
12
broad histone mark
12
narrow histone mark
4
control
3
RNA binding protein
1
chromatin remodeller
Date released
295
November, 2017
148
May, 2021
144
May, 2020
124
October, 2019
66
August, 2021
64
November, 2018
62
December, 2017
62
June, 2019
60
July, 2019
56
August, 2017
53
February, 2023
48
March, 2020
45
July, 2018
43
February, 2021
39
April, 2018
28
December, 2018
25
February, 2020
24
November, 2019
21
January, 2019
14
May, 2019
10
November, 2020
8
October, 2018
7
December, 2019
7
October, 2017
5
January, 2021
5
March, 2019
3
August, 2018
3
October, 2022
2
April, 2019
2
May, 2022
2
September, 2017
1
February, 2018
1
June, 2018
1
March, 2023
1
September, 2018
Available data
55
fastq
52
bam
49
bigWig
35
bed narrowPeak
32
bed bed3+
18
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
12
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
29
tissue
19
primary cell
8
in vitro differentiated cells
Organ
20
pancreas
12
connective tissue
4
adipose tissue
4
liver
2
musculature of body
1
epithelium
Project
56
AMP
Genome assembly (visualization)
55
hg19
47
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
replication_type!
unreplicated
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
DNase-seq
RRBS
tissue
islet of Langerhans
18
1
liver
3
1
white adipose tissue
4
skeletal muscle tissue
2
primary cell
skeletal muscle myoblast
15
2
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
7
1
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