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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
248
ChIP-seq
89
total RNA-seq
9
WGBS
5
ATAC-seq
2
RRBS
1
DNase-seq
1
FAIRE-seq
Assay category
248
DNA binding
89
Transcription
11
DNA methylation
7
DNA accessibility
Target of assay
175
histone modification
174
histone
97
broad histone mark
76
narrow histone mark
46
control
27
transcription factor
5
RNA binding protein
2
chromatin remodeller
Date released
672
February, 2021
355
August, 2017
253
August, 2021
251
May, 2021
198
May, 2022
197
May, 2020
190
October, 2019
156
June, 2019
152
February, 2023
123
July, 2018
111
November, 2017
106
May, 2019
78
April, 2019
72
September, 2018
68
October, 2018
59
September, 2020
48
July, 2019
47
September, 2023
40
May, 2024
38
February, 2018
37
November, 2019
32
December, 2017
24
November, 2018
19
April, 2020
16
March, 2020
16
October, 2017
15
May, 2023
11
January, 2021
10
April, 2018
9
January, 2019
9
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
6
November, 2020
4
March, 2023
3
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
232
fastq
230
bam
223
bigWig
107
bed narrowPeak
89
tsv
73
tagAlign
26
bed broadPeak
24
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
Organism
348
Homo sapiens
Biosample type
255
tissue
60
in vitro differentiated cells
40
primary cell
Organ
168
pancreas
113
connective tissue
53
adipose tissue
50
liver
28
epithelium
24
musculature of body
Project
355
AMP
Genome assembly (visualization)
221
hg19
202
GRCh38
Lab
355
AMP-T2D consortium
Audit category:
25
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
355 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
RRBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
24
89
1
liver
45
3
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
2
pancreas
14
+ See 4 more…
in vitro differentiated cells
adipocyte
60
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
12
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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