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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 246ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 5DNase-seq
  • 1FAIRE-seq
Assay category
  • 246DNA binding
  • 89Transcription
  • 15DNA methylation
  • 11DNA accessibility
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 712February, 2021
  • 390May, 2021
  • 361August, 2017
  • 335November, 2017
  • 318May, 2020
  • 307August, 2021
  • 275October, 2019
  • 210June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 105July, 2019
  • 97May, 2019
  • 82November, 2018
  • 73December, 2017
  • 73September, 2018
  • 66April, 2019
  • 64March, 2020
  • 59November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47October, 2018
  • 47September, 2023
  • 40May, 2024
  • 31December, 2018
  • 31February, 2018
  • 26January, 2019
  • 25February, 2020
  • 20October, 2017
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 11November, 2020
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 271bigWig
  • 256fastq
  • 251bam
  • 142bed narrowPeak
  • 89tsv
  • 74tagAlign
  • 42bigBed narrowPeak
  • 41bed broadPeak
  • 31bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 355Homo sapiens
Biosample type
  • 255tissue
  • 60in vitro differentiated cells
  • 46primary cell
Organ
  • 167pancreas
  • 111connective tissue
  • 51adipose tissue
  • 43liver
  • 23musculature of body
  • 17epithelium
Project
  • 361AMP
Genome assembly (visualization)
  • 273hg19
  • 247GRCh38
Lab
  • 361AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 16inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
target.investigated_as!
  • control
BIOSAMPLE
ASSAY

361 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans358911
liver3731
subcutaneous abdominal adipose tissue313
skeletal muscle tissue194
pancreas12
in vitro differentiated cells
adipocyte591
primary cell
skeletal muscle myoblast1412
pancreatic endocrine cell12
pancreatic alpha cell71
pancreatic beta cell71
pancreatic acinar cell1
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