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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 97ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 5DNase-seq
  • 1FAIRE-seq
Assay category
  • 97DNA binding
  • 89Transcription
  • 15DNA methylation
  • 11DNA accessibility
Target of assay
  • histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 715February, 2021
  • 318November, 2017
  • 314May, 2020
  • 299August, 2021
  • 259May, 2021
  • 212August, 2017
  • 205February, 2023
  • 200May, 2022
  • 199June, 2019
  • 168July, 2018
  • 118October, 2019
  • 108July, 2019
  • 88November, 2018
  • 63December, 2017
  • 61March, 2020
  • 59September, 2020
  • 51November, 2019
  • 49April, 2018
  • 47September, 2023
  • 46October, 2018
  • 41September, 2018
  • 35December, 2018
  • 28May, 2019
  • 25February, 2020
  • 23February, 2018
  • 23January, 2019
  • 20April, 2019
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11October, 2017
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 5May, 2024
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 184fastq
  • 179bam
  • 149bigWig
  • 89tsv
  • 34bed narrowPeak
  • 21bed bed3+
  • 12bigBed narrowPeak
  • 11tagAlign
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 211Homo sapiens
Biosample type
  • 160tissue
  • 31in vitro differentiated cells
  • 21primary cell
Organ
  • 122pancreas
  • 56connective tissue
  • 25adipose tissue
  • 21liver
  • 15epithelium
  • 7musculature of body
Project
  • 212AMP
Genome assembly (visualization)
  • 153hg19
  • 146GRCh38
Lab
  • 212AMP-T2D consortium
Audit category:
  • 23missing controlled_by
Audit category:
  • 6inconsistent control read length
target.investigated_as!
  • histone modification
BIOSAMPLE
ASSAY

212 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans148911
liver1531
white adipose tissue12
subcutaneous abdominal adipose tissue53
skeletal muscle tissue34
in vitro differentiated cells
adipocyte301
primary cell
pancreatic alpha cell61
pancreatic beta cell61
skeletal muscle myoblast312
pancreatic acinar cell1
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