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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 208ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 5DNase-seq
  • 1FAIRE-seq
Assay category
  • 208DNA binding
  • 89Transcription
  • 15DNA methylation
  • 11DNA accessibility
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 715February, 2021
  • 368November, 2017
  • 335May, 2021
  • 323August, 2017
  • 314May, 2020
  • 308August, 2021
  • 207June, 2019
  • 205February, 2023
  • 200May, 2022
  • 173October, 2019
  • 168July, 2018
  • 108July, 2019
  • 88November, 2018
  • 86May, 2019
  • 78December, 2017
  • 65October, 2018
  • 61March, 2020
  • 59September, 2020
  • 58September, 2018
  • 57April, 2019
  • 57November, 2019
  • 49April, 2018
  • 47September, 2023
  • 35December, 2018
  • 31February, 2018
  • 27January, 2019
  • 25February, 2020
  • 25May, 2024
  • 21October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 235fastq
  • 230bam
  • 212bigWig
  • 92bed narrowPeak
  • 89tsv
  • 56tagAlign
  • 30bigBed narrowPeak
  • 27bed bed3+
  • 26bed broadPeak
  • 10bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 318Homo sapiens
Biosample type
  • 234tissue
  • 52in vitro differentiated cells
  • 37primary cell
Organ
  • 154pancreas
  • 97connective tissue
  • 45adipose tissue
  • 41liver
  • 21epithelium
  • 19musculature of body
Project
  • 323AMP
Genome assembly (visualization)
  • 216hg19
  • 197GRCh38
Lab
  • 323AMP-T2D consortium
Audit category:
  • 28missing controlled_by
Audit category:
  • 9inconsistent control read length
  • 2inconsistent assembly
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

323 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans288911
liver3531
subcutaneous abdominal adipose tissue253
skeletal muscle tissue154
white adipose tissue12
in vitro differentiated cells
adipocyte511
primary cell
skeletal muscle myoblast912
pancreatic alpha cell91
pancreatic beta cell91
pancreatic endocrine cell4
pancreatic acinar cell1
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