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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 249ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 5DNase-seq
  • 1FAIRE-seq
Assay category
  • 249DNA binding
  • 89Transcription
  • 15DNA methylation
  • 11DNA accessibility
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 710February, 2021
  • 383May, 2021
  • 364August, 2017
  • 341May, 2020
  • 308August, 2021
  • 307October, 2019
  • 214June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 162November, 2017
  • 115May, 2019
  • 108July, 2019
  • 74April, 2019
  • 73September, 2018
  • 64March, 2020
  • 61October, 2018
  • 60November, 2019
  • 59September, 2020
  • 52December, 2017
  • 49April, 2018
  • 47September, 2023
  • 39February, 2018
  • 35May, 2024
  • 25February, 2020
  • 24November, 2018
  • 23October, 2017
  • 19April, 2020
  • 16January, 2019
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 7December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 240fastq
  • 235bam
  • 225bigWig
  • 118bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 40bigBed narrowPeak
  • 39bed broadPeak
  • 14bed bed3+
  • 13bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 357Homo sapiens
Biosample type
  • 261tissue
  • 57primary cell
  • 46in vitro differentiated cells
Organ
  • 181pancreas
  • 91connective tissue
  • 50liver
  • 45adipose tissue
  • 29epithelium
  • 26musculature of body
Project
  • 364AMP
Genome assembly (visualization)
  • 229hg19
  • 203GRCh38
Lab
  • 364AMP-T2D consortium
Audit category:
  • 16missing controlled_by
Audit category:
  • 10inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
target.investigated_as!
  • transcription factor
BIOSAMPLE
ASSAY

364 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans358911
liver4431
subcutaneous abdominal adipose tissue363
skeletal muscle tissue224
pancreas14
primary cell
skeletal muscle myoblast1312
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
pancreatic acinar cell1
in vitro differentiated cells
adipocyte451
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