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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 109ChIP-seq
Assay category
  • 109DNA binding
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 109August, 2017
  • 76May, 2021
  • 58May, 2019
  • 55October, 2019
  • 50November, 2017
  • 37April, 2019
  • 20May, 2024
  • 19October, 2018
  • 17September, 2018
  • 15December, 2017
  • 10October, 2017
  • 9August, 2021
  • 8February, 2018
  • 8June, 2019
  • 6November, 2019
  • 4January, 2019
Available data
  • 61bigWig
  • 56bed narrowPeak
  • 49bam
  • 49fastq
  • 45tagAlign
  • 22bed broadPeak
  • 18bigBed narrowPeak
  • 6bed bed3+
  • 6bigBed broadPeak
Organism
  • 105Homo sapiens
Biosample type
  • 73tissue
  • 20in vitro differentiated cells
  • 16primary cell
Organ
  • 40connective tissue
  • 32pancreas
  • 20adipose tissue
  • 19liver
  • 12musculature of body
  • 6epithelium
Project
  • 109AMP
Genome assembly (visualization)
  • 61hg19
  • 49GRCh38
Lab
  • 109AMP-T2D consortium
Audit category:
  • 5missing controlled_by
Audit category:
  • 3inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

109 results

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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue20
liver19
islet of Langerhans14
skeletal muscle tissue12
pancreas8
in vitro differentiated cells
adipocyte20
primary cell
skeletal muscle myoblast6
pancreatic endocrine cell4
pancreatic alpha cell3
pancreatic beta cell3
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