Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 199ChIP-seq
Assay category
  • 199DNA binding
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 199August, 2017
  • 196October, 2019
  • 140May, 2021
  • 92May, 2019
  • 88November, 2017
  • 60April, 2019
  • 35May, 2024
  • 32September, 2018
  • 31December, 2017
  • 30October, 2018
  • 27May, 2020
  • 20August, 2021
  • 19June, 2019
  • 16February, 2018
  • 12October, 2017
  • 10November, 2019
  • 7January, 2019
  • 3March, 2020
Available data
  • 123bigWig
  • 108bed narrowPeak
  • 103bam
  • 103fastq
  • 74tagAlign
  • 37bed broadPeak
  • 30bigBed narrowPeak
  • 12bed bed3+
  • 11bigBed broadPeak
Organism
  • 193Homo sapiens
Biosample type
  • 124tissue
  • 38primary cell
  • 37in vitro differentiated cells
Organ
  • 69connective tissue
  • 66pancreas
  • 33liver
  • 32adipose tissue
  • 19musculature of body
  • 14epithelium
Project
  • 199AMP
Genome assembly (visualization)
  • 123hg19
  • 103GRCh38
Lab
  • 199AMP-T2D consortium
Audit category:
  • 16missing controlled_by
Audit category:
  • 10inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

199 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
liver33
subcutaneous abdominal adipose tissue31
islet of Langerhans28
skeletal muscle tissue19
pancreas12
primary cell
pancreatic endocrine cell12
skeletal muscle myoblast12
pancreatic alpha cell7
pancreatic beta cell7
in vitro differentiated cells
adipocyte37
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego