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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 88ChIP-seq
Assay category
  • 88DNA binding
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 141October, 2019
  • 88August, 2017
  • 64May, 2021
  • 38November, 2017
  • 34May, 2019
  • 27May, 2020
  • 23April, 2019
  • 16December, 2017
  • 15May, 2024
  • 15September, 2018
  • 11August, 2021
  • 11June, 2019
  • 11October, 2018
  • 8February, 2018
  • 4November, 2019
  • 3January, 2019
  • 3March, 2020
  • 2October, 2017
Available data
  • 60bigWig
  • 52bam
  • 52fastq
  • 50bed narrowPeak
  • 29tagAlign
  • 15bed broadPeak
  • 12bigBed narrowPeak
  • 6bed bed3+
  • 5bigBed broadPeak
Organism
  • 86Homo sapiens
Biosample type
  • 50tissue
  • 22primary cell
  • 16in vitro differentiated cells
Organ
  • 34pancreas
  • 28connective tissue
  • 13liver
  • 12adipose tissue
  • 8epithelium
  • 7musculature of body
Project
  • 88AMP
Genome assembly (visualization)
  • 60hg19
  • 52GRCh38
Lab
  • 88AMP-T2D consortium
Audit category:
  • 11missing controlled_by
Audit category:
  • 7inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

88 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans14
liver13
subcutaneous abdominal adipose tissue11
skeletal muscle tissue7
pancreas4
primary cell
pancreatic endocrine cell8
skeletal muscle myoblast6
pancreatic alpha cell4
pancreatic beta cell4
in vitro differentiated cells
adipocyte16
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