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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
3
single cell RNA-seq
1
Hi-C
1
pCHi-C
Assay category
34
DNA binding
3
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
271
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
39
fastq
37
bam
33
bigWig
30
bed narrowPeak
30
bigBed narrowPeak
3
tsv
1
bedpe bed3+
Organism
39
Homo sapiens
Biosample type
28
cell line
7
tissue
3
primary cell
1
in vitro differentiated cells
Organ
27
blood
27
bodily fluid
7
spleen
3
epithelium
3
pancreas
1
adipose tissue
1
connective tissue
1
liver
Project
39
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
39
AMP-T2D consortium
Audit category:
1
inconsistent control
organ_slims!
nerve
skin of body
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
single cell RNA-seq
Hi-C
pCHi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
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