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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
74
ChIP-seq
51
single cell RNA-seq
1
pCHi-C
Assay category
173
Transcription
74
DNA binding
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
313
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
243
bam
214
bigWig
169
tsv
114
fastq
45
bed narrowPeak
45
bigBed narrowPeak
1
bedpe bed3+
Organism
248
Homo sapiens
Biosample type
194
tissue
53
primary cell
1
in vitro differentiated cells
Organ
213
pancreas
38
epithelium
26
connective tissue
24
adipose tissue
Project
248
AMP
Genome assembly (visualization)
214
GRCh38
214
hg19
Lab
248
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
January, 2019
organ_slims!
lymph node
BIOSAMPLE
ASSAY
248 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
islet of Langerhans
120
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 1 more…
primary cell
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic acinar cell
2
6
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
in vitro differentiated cells
white fat cell
1
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