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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
3
small RNA-seq
1
Hi-C
1
RRBS
1
pCHi-C
Assay category
16
Transcription
1
3D chromatin structure
1
DNA methylation
Date released
539
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
3
May, 2021
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
17
bigWig
16
bam
16
tsv
1
bed bed3+
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
fastq
1
hdf5
Organism
19
Homo sapiens
Biosample type
10
tissue
8
primary cell
1
in vitro differentiated cells
Organ
25
heart
19
connective tissue
18
brain
16
epithelium
13
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
9
pancreas
5
limb
3
artery
2
pericardium
1
eye
0
bone element
Project
19
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
skeleton
BIOSAMPLE
ASSAY
19 results
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total RNA-seq
small RNA-seq
Hi-C
RRBS
pCHi-C
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
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in vitro differentiated cells
white fat cell
1
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