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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
7
ATAC-seq
6
WGBS
5
DNase-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
21
DNA binding
13
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
15
transcription factor
6
control
3
other context
3
other post-translational modification
2
RNA binding protein
2
chromatin remodeller
Date released
397
May, 2021
303
October, 2019
279
August, 2021
257
February, 2021
232
August, 2017
199
June, 2019
191
February, 2023
166
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
91
November, 2017
80
April, 2019
July, 2019
73
September, 2018
60
November, 2019
59
March, 2020
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
34
November, 2018
31
December, 2017
25
January, 2019
22
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
November, 2020
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
41
fastq
34
bigWig
33
bam
21
bed narrowPeak
21
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
csv
Organism
41
Homo sapiens
Biosample type
18
tissue
15
cell line
8
primary cell
Organ
liver
15
blood
15
bodily fluid
14
pancreas
9
spleen
7
epithelium
2
brain
1
adipose tissue
connective tissue
Project
34
AMP
7
HPAP
Genome assembly (visualization)
33
GRCh38
21
hg19
Lab
34
AMP-T2D consortium
7
Klaus Kaestner, Upenn
month_released!
July, 2019
organ_slims!
connective tissue
liver
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
2
1
body of pancreas
2
2
pancreas
2
1
brain
2
cell line
GM12878
15
primary cell
pancreatic alpha cell
5
pancreatic beta cell
2
pancreatic cell
1
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