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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
Assay category
43
DNA binding
Target of assay
43
histone
43
histone modification
25
transcription factor
24
control
22
narrow histone mark
21
broad histone mark
7
RNA binding protein
6
chromatin remodeller
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
42
bed narrowPeak
42
bigWig
39
bam
23
fastq
16
tagAlign
7
bigBed narrowPeak
3
bed bed3+
Organism
43
Homo sapiens
Biosample type
30
in vitro differentiated cells
6
tissue
4
cell line
3
primary cell
Organ
6
embryo
6
liver
6
spleen
3
epithelium
1
blood
1
bodily fluid
Project
43
AMP
Genome assembly (visualization)
41
hg19
39
GRCh38
Lab
40
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
14
pancreatic endoderm
6
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
+ See 2 more…
tissue
spleen
6
cell line
HepG2
3
GM12878
1
primary cell
hepatocyte
3
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