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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
single cell RNA-seq
52
total RNA-seq
30
DNase-seq
11
ChIP-seq
8
ATAC-seq
Assay category
144
Transcription
38
DNA accessibility
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
144
tsv
101
bam
89
bigWig
45
bed narrowPeak
33
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
Organism
193
Homo sapiens
Biosample type
119
tissue
66
cell line
8
primary cell
Organ
478
connective tissue
388
adipose tissue
219
kidney
193
heart
150
bone element
79
vasculature
77
blood vessel
70
artery
58
epithelium
43
musculature of body
40
liver
40
pancreas
38
limb
30
brain
18
ureter
8
embryo
8
skeleton
7
eye
Project
193
AMP
Genome assembly (visualization)
97
GRCh38
94
hg19
Lab
193
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
193 results
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single cell RNA-seq
total RNA-seq
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart left ventricle
18
3
left cardiac atrium
18
1
heart
18
heart right ventricle
17
1
right cardiac atrium
18
+ See 9 more…
cell line
smooth muscle cell of the coronary artery
52
6
8
primary cell
cardiac fibroblast
3
5
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