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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
total RNA-seq
37
single cell RNA-seq
2
Capture-C
1
Hi-C
Assay category
158
Transcription
1
3D chromatin structure
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
154
tsv
153
bam
153
bigWig
39
fastq
1
bedpe bed3+
Organism
161
Homo sapiens
Biosample type
122
tissue
37
primary cell
2
cell line
Organ
161
pancreas
130
kidney
92
heart
39
epithelium
35
liver
8
embryo
7
connective tissue
6
blood vessel
6
vasculature
2
artery
1
adipose tissue
Project
161
AMP
Genome assembly (visualization)
153
GRCh38
153
hg19
Lab
159
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
month_released!
June, 2019
organ_slims!
blood
BIOSAMPLE
ASSAY
161 results
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total RNA-seq
single cell RNA-seq
Capture-C
Hi-C
tissue
islet of Langerhans
121
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic ductal cell
3
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cell line
EndoC_BH1
2
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