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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
3
total RNA-seq
2
Capture-C
1
Hi-C
1
single cell RNA-seq
Assay category
51
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
control
11
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
54
bam
43
bigWig
40
bed narrowPeak
40
bigBed narrowPeak
38
fastq
4
tsv
1
bedpe bed3+
Organism
58
Homo sapiens
Biosample type
53
tissue
3
primary cell
2
cell line
Organ
130
kidney
92
heart
58
pancreas
35
liver
28
connective tissue
24
adipose tissue
9
epithelium
8
embryo
6
blood vessel
6
vasculature
2
artery
Project
58
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
56
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
total RNA-seq
Capture-C
Hi-C
single cell RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
islet of Langerhans
1
1
pancreas
2
primary cell
pancreatic acinar cell
2
pancreatic ductal cell
1
cell line
EndoC_BH1
2
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