Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
49
total RNA-seq
8
single cell RNA-seq
6
snATAC-seq
2
STARR-seq
2
pCHi-C
1
Hi-C
Assay category
70
DNA accessibility
57
Transcription
1
3D chromatin structure
Date released
130
August, 2021
68
June, 2019
47
September, 2023
23
April, 2019
17
October, 2019
14
May, 2023
8
February, 2021
4
July, 2019
2
December, 2019
2
March, 2020
Available data
64
bed narrowPeak
64
xls
57
txt
2
tsv
1
hic
Organism
132
Homo sapiens
Biosample type
128
tissue
4
cell line
Organ
132
kidney
99
heart
38
liver
18
pancreas
epithelium
10
blood vessel
10
vasculature
8
embryo
7
connective tissue
5
musculature of body
2
adipose tissue
2
artery
2
brain
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
132
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
2
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
month_released!
June, 2018
organ_slims!
epithelium
small intestine
BIOSAMPLE
ASSAY
132 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
STARR-seq
pCHi-C
Hi-C
tissue
kidney
64
49
8
6
1
cell line
HEK293T
2
RCC 7860 VHL
1
RCC 7860 vector
1
Download