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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
75
transcription factor
23
control
22
RNA binding protein
20
histone
20
histone modification
16
recombinant protein
11
narrow histone mark
9
broad histone mark
7
chromatin remodeller
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
0
November, 2020
Available data
74
bed narrowPeak
74
bigWig
64
bam
64
fastq
63
bigBed narrowPeak
Organism
75
Homo sapiens
Biosample type
68
cell line
7
tissue
Organ
60
liver
12
blood
12
bodily fluid
3
spleen
Project
75
AMP
Genome assembly (visualization)
72
hg19
63
GRCh38
Lab
64
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
April, 2018
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
cell line
HepG2
56
GM12878
12
tissue
liver
4
spleen
3
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