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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
Capture-C
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
17
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
19
December, 2017
19
September, 2020
17
June, 2019
16
November, 2019
14
October, 2019
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
November, 2020
5
March, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
19
bam
15
bed narrowPeak
15
bigWig
4
tagAlign
3
bed bed3+
1
bedpe bed3+
1
hic
1
tsv
Organism
22
Homo sapiens
Biosample type
18
cell line
4
primary cell
Organ
130
kidney
92
heart
59
pancreas
35
liver
22
epithelium
8
embryo
6
blood vessel
6
connective tissue
vasculature
2
adipose tissue
2
artery
Project
22
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
month_released!
July, 2019
organ_slims!
vasculature
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
Capture-C
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
2
1
1
1
primary cell
hepatocyte
4
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