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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
16
total RNA-seq
12
ATAC-seq
4
STARR-seq
4
snATAC-seq
2
Capture-C
1
Hi-C
Assay category
27
DNA binding
16
DNA accessibility
16
Transcription
1
3D chromatin structure
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
8
control
2
transcription factor
Date released
295
November, 2017
148
May, 2021
144
May, 2020
124
October, 2019
66
August, 2021
64
November, 2018
62
December, 2017
62
June, 2019
60
July, 2019
56
August, 2017
53
February, 2023
48
March, 2020
45
July, 2018
43
February, 2021
39
April, 2018
28
December, 2018
25
February, 2020
24
November, 2019
21
January, 2019
14
May, 2019
10
November, 2020
8
October, 2018
7
December, 2019
7
October, 2017
5
January, 2021
5
March, 2019
3
August, 2018
3
October, 2022
2
April, 2019
2
May, 2022
2
September, 2017
1
February, 2018
1
June, 2018
1
March, 2023
1
September, 2018
Available data
49
bam
35
bigWig
30
bed narrowPeak
24
tagAlign
16
tsv
5
bed bed3+
1
bedpe bed3+
Organism
66
Homo sapiens
Biosample type
42
in vitro differentiated cells
14
cell line
6
tissue
4
primary cell
Organ
8
embryo
8
liver
6
kidney
4
connective tissue
4
epithelium
2
pancreas
Project
66
AMP
Genome assembly (visualization)
46
hg19
41
GRCh38
Lab
50
AMP-T2D consortium
8
Bing Ren, UCSD
4
Katalin Susztak, Upenn
4
Struan F.A. Grant, CHOP
replication_type!
unreplicated
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
STARR-seq
snATAC-seq
Capture-C
Hi-C
in vitro differentiated cells
neural progenitor cell
21
7
10
adipocyte
1
1
osteoblast
1
1
cell line
H1-hESC
8
HepG2
2
2
HEK293T
2
tissue
kidney
4
islet of Langerhans
1
1
primary cell
hepatocyte
4
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