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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
272
ChIP-seq
Assay category
272
DNA binding
Target of assay
272
transcription factor
88
histone
88
histone modification
75
control
66
recombinant protein
50
broad histone mark
39
RNA binding protein
38
narrow histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
0
August, 2022
Available data
272
fastq
271
bam
268
bigWig
264
bed narrowPeak
264
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
272
Homo sapiens
Biosample type
266
cell line
3
primary cell
3
tissue
Organ
241
liver
25
blood
25
bodily fluid
3
brain
3
spleen
2
epithelium
2
vasculature
1
blood vessel
Project
272
AMP
Genome assembly (visualization)
266
hg19
232
GRCh38
Lab
272
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
272 results
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Clear Filters
ChIP-seq
cell line
HepG2
241
GM12878
25
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
tissue
spleen
3
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