Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
10
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
1
snATAC-seq
Assay category
54
DNA binding
13
Transcription
1
DNA accessibility
Target of assay
42
histone
42
histone modification
24
broad histone mark
19
transcription factor
18
narrow histone mark
RNA binding protein
6
chromatin remodeller
4
control
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
60
bigWig
50
bed narrowPeak
29
bam
24
fastq
15
bigBed narrowPeak
14
tsv
Organism
70
Homo sapiens
Biosample type
46
tissue
17
cell line
5
primary cell
2
in vitro differentiated cells
Organ
35
heart
12
blood
12
bodily fluid
10
liver
7
spleen
6
epithelium
3
kidney
1
pancreas
Project
70
AMP
Genome assembly (visualization)
60
GRCh38
25
hg19
Lab
35
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
5
audit script error
2
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
70 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
snATAC-seq
tissue
left cardiac atrium
35
spleen
7
islet of Langerhans
1
kidney
1
kidney interstitium
1
+ See 1 more…
cell line
GM12878
12
HepG2
5
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
Download