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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
2
DNase-seq
2
Hi-C
2
total RNA-seq
1
FAIRE-seq
Assay category
22
DNA binding
3
DNA accessibility
2
3D chromatin structure
2
Transcription
Target of assay
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
2
control
Date released
92
August, 2021
57
April, 2019
40
May, 2024
33
June, 2019
29
October, 2019
22
July, 2019
16
May, 2019
8
March, 2020
3
May, 2021
2
February, 2020
1
February, 2023
0
August, 2022
Available data
27
bam
22
bigWig
18
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
29
Homo sapiens
Biosample type
21
primary cell
8
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
artery
21
eye
21
vein
19
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
29
AMP
Genome assembly (visualization)
24
hg19
19
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
artery
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
DNase-seq
Hi-C
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
1
tissue
heart
5
1
2
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