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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
19
ChIP-seq
6
WGBS
Assay category
26
Transcription
19
DNA binding
6
DNA methylation
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
0
March, 2023
Available data
45
bam
42
bigWig
32
tsv
25
fastq
16
bed narrowPeak
14
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
26
cell line
19
in vitro differentiated cells
6
primary cell
Organ
455
connective tissue
386
adipose tissue
150
bone element
66
artery
66
blood vessel
66
heart
66
liver
66
vasculature
51
epithelium
32
pancreas
13
embryo
8
kidney
8
skeleton
6
limb
Project
45
AMP
6
HPAP
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
45
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
30
inconsistent ontology term
Audit category:
1
inconsistent control read length
month_released!
December, 2019
BIOSAMPLE
ASSAY
51 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
cell line
EndoC_BH1
26
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
primary cell
pancreatic alpha cell
6
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