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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
5
total RNA-seq
2
DNase-seq
Assay category
63
DNA binding
5
Transcription
2
DNA accessibility
Target of assay
33
transcription factor
17
histone
17
histone modification
13
control
10
broad histone mark
7
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
70
bam
68
fastq
57
bigWig
52
bed narrowPeak
52
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
70
Homo sapiens
Biosample type
48
tissue
15
in vitro differentiated cells
5
cell line
2
primary cell
Organ
81
kidney
70
liver
43
musculature of body
39
epithelium
35
heart
32
limb
30
brain
18
blood
18
bodily fluid
18
connective tissue
18
ureter
13
embryo
7
eye
7
spleen
7
vasculature
5
blood vessel
4
pancreas
2
artery
1
adipose tissue
Project
70
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
70
AMP-T2D consortium
Audit category:
27
inconsistent control
month_released!
February, 2023
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
cell line
HepG2
5
primary cell
hepatic stellate cell
1
hepatocyte
1
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