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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
ChIP-seq
Assay category
177
DNA binding
Target of assay
98
histone
98
histone modification
58
broad histone mark
47
transcription factor
41
control
40
narrow histone mark
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
403
August, 2017
394
May, 2021
341
May, 2020
318
August, 2021
281
November, 2017
228
October, 2019
204
February, 2023
200
May, 2022
184
June, 2019
168
July, 2018
90
December, 2017
90
July, 2019
87
May, 2019
76
April, 2019
73
September, 2018
65
November, 2018
65
October, 2018
62
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
24
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
177
bam
135
bed narrowPeak
135
bigWig
113
bigBed narrowPeak
90
fastq
15
bed bed3+
Organism
177
Homo sapiens
Biosample type
129
tissue
41
in vitro differentiated cells
4
primary cell
3
stem cell
Organ
59
liver
47
blood vessel
47
vasculature
brain
21
epithelium
19
heart
13
embryo
7
limb
7
musculature of body
4
artery
4
kidney
2
pancreas
Project
177
AMP
Genome assembly (visualization)
140
hg19
139
GRCh38
Lab
177
AMP-T2D consortium
Audit category:
27
inconsistent control
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
February, 2020
organ_slims!
brain
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
177 results
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Clear Filters
ChIP-seq
tissue
liver
37
ascending aorta
15
thoracic aorta
15
aorta
13
germinal matrix
12
+ See 6 more…
in vitro differentiated cells
hepatocyte
13
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
kidney epithelial cell
4
stem cell
hESC
3
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