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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
2
total RNA-seq
Assay category
10
DNA binding
2
Transcription
Target of assay
6
histone
6
histone modification
5
narrow histone mark
4
control
transcription factor
1
broad histone mark
Date released
13
February, 2018
10
December, 2017
8
August, 2021
2
May, 2021
1
January, 2018
0
May, 2022
Available data
12
bam
10
fastq
7
bigWig
5
bed narrowPeak
3
bed bed3+
2
tsv
Organism
12
Homo sapiens
Biosample type
12
in vitro differentiated cells
Organ
164
pancreas
122
epithelium
70
liver
12
embryo
3
heart
2
connective tissue
2
musculature of body
1
bone element
1
bone marrow
1
thymus
Project
12
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
12
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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