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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
single cell RNA-seq
32
ChIP-seq
5
total RNA-seq
2
RNA microarray
1
Hi-C
Assay category
55
Transcription
32
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
RNA binding protein
2
chromatin remodeller
Date released
394
May, 2021
369
November, 2017
346
August, 2017
341
May, 2020
329
February, 2021
317
August, 2021
313
October, 2019
213
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
96
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
66
November, 2018
63
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
24
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
37
bam
33
bigWig
33
fastq
28
bed narrowPeak
28
bigBed narrowPeak
9
tsv
Organism
90
Homo sapiens
Biosample type
57
tissue
26
cell line
5
primary cell
2
in vitro differentiated cells
Organ
50
kidney
25
blood
25
bodily fluid
7
spleen
6
epithelium
6
liver
Project
47
KPMP
43
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
47
KPMP
43
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
1
inconsistent control
organ_slims!
adipose tissue
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
90 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
RNA microarray
Hi-C
tissue
kidney
48
spleen
7
kidney interstitium
1
renal glomerulus
1
cell line
GM12878
25
HepG2
1
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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